.. _`ris-installed-applications`:

==========================
RIS-Installed Applications
==========================

This page contains a list of applications installed to persistent storage and accessed via Docker containers. These can be run on the command
line and :ref:`Open OnDemand <compute-ood>` for those who want visualization using :ref:`THPC <ris-thpc-quickstart>`.

Applications marked with an asterisk, while installed by RIS, are community-owned and may require separate licensing.
Instructions for accessing these can be found in the `Engineering Modules <https://docs.ris.wustl.edu/doc/compute/recipes/tools/ris-thpc-quickstart.html#open-ondemand-engineering-modules>`_ documentation.

To request an application not seen here, reach out to the `RIS Service Desk <https://washu.atlassian.net/servicedesk/customer/portal/2/group/6/create/55>`_.

.. contents::
   :depth: 1
   :local:


A
-

- abaqus *
- Anaconda3
- ant
- at-spi2-atk
- at-spi2-core
- ATK
- Autoconf
- Automake
- Autotools

B
-

- binutils
- Bison
- BLIS
- Boost
- Brotli
- bzip2

C
-

- cadence *
- cairo
- CGAL
- Clang
- CMake
- comsol *
- Coot
- cuda
- CUDA
- cuDNN
- cURL

D
-

- DB
- Dbeaver
- DBus
- double-conversion
- Doxygen

E
-

- Eigen
- elfutils
- expat

F
-

- FFmpeg
- ffnvcodec
- FFTW
- FFTW.MPI
- Firefox
- FLAC
- flex
- FlexiBLAS
- FLTK
- fontconfig
- foss
- freetype
- FriBidi
- fuse2
- fuse3

G
-

- gawk
- GCC
- GCCcore
- GDAL
- Gdk-Pixbuf
- GDRCopy
- GEOS
- gettext
- Ghostscript
- git
- GLib
- GLPK
- GMP
- gnuplot
- GObject-Introspection
- gompi
- googletest
- gperf
- graphite2
- groff
- GSL
- GTK+
- GTK2
- gzip

H
-

- HarfBuzz
- HDF
- HDF5
- help2man
- hwloc
- hypothesis

I
-

- ICU
- IGV
- iimpi
- ImageMagick
- imkl
- imkl-FFTW
- impi
- InstantClient
- intel
- intel-compilers
- intltool

J
-

- JasPer
- Java
- jbigkit
- Julia

K
-

- keysight *
- ksh

L
-

- LAME
- libarchive
- libcerf
- libdeflate
- libdrm
- libepoxy
- libevent
- libfabric
- libffi
- libgd
- libgeotiff
- libgit2
- libGLU
- libglvnd
- libiconv
- libjpeg-turbo
- libogg
- libopus
- libpciaccess
- libpng
- libsndfile
- LibTIFF
- libtirpc
- libtool
- libunwind
- libvorbis
- libxml2
- libxslt
- LittleCMS
- LLVM
- lmod
- Lua
- lz4

M
-

- M4
- make
- makeinfo
- Mako
- MATLAB
- Mesa
- Meson
- METIS
- Miniconda3
- mosh
- MPFR

N
-

- NASM
- NCCL
- ncurses
- netCDF
- nettle
- Ninja
- nlohmann_json
- NLopt
- nodejs
- NSPR
- NSS
- numactl

O
-

- OpenBLAS
- OpenFOAM
- OpenJPEG
- OpenMPI
- OpenSSL

P
-

- Pango
- parallel-tar
- ParaView
- PCRE
- PCRE2
- Perl
- Perl-bundle-CPAN
- pixman
- pkg-config
- pkgconf
- PMIx
- PostgreSQL
- PROJ
- pybind11
- Python

Q
-

- Qt5

R
-

- R
- re2c
- RELION
- RStudio-Server
- rsync
- Ruby
- Rust

S
-

- SAMtools
- SAS
- ScaLAPACK
- SciPy-bundle
- SCOTCH
- settarg
- snappy
- SOCI
- SQLite
- Stata
- Szip

T
-

- tbb
- Tcl
- tcsh
- Tk

U
-

- UCC
- UCX
- UCX-CUDA
- UDUNITS
- UnZip
- util-linux

V
-

- Vim
- vscode
- VSCode

W
-

X
-

- X11
- x264
- x265
- xilinx *
- xorg-macros
- xprop
- Xvfb
- XZ

Y
-

- yaml-cpp
- Yasm

Z
-

- Z3
- zlib
- zsh
- zstd