.. _`ris-supported-containers`:

====================================
RIS-Supported Application Containers
====================================

Overview
--------

- This page contains links to Docker images and Docker files that have been
  developed in collaboration with users.

Hosted and Maintained Images
----------------------------

- The following are Docker images that are hosted in an RIS repository and are
  maintained by RIS.

.. toctree::
    :maxdepth: 1

    tools/alphafold-quickstart
    tools/aspera-quickstart
    tools/cistem-dockerimage
    tools/fsl6-dockerimage
    tools/globus-connect-personal-dockerimage
    tools/intel-oneapi-quickstart
    tools/matlab-quickstart
    tools/ris-nextflow-quickstart
    tools/novnc-dockerimage
    tools/parabricks-quickstart
    tools/parallel-tar
    tools/relion-dockerimage
    tools/ris-rstudio
    tools/sas-compute-tool
    tools/stata-quickstart
    tools/tensorflow-quickstart
    tools/ris-thpc-quickstart
    tools/tortoise-dockerimage

Developed But Not Maintained
----------------------------

- The following are Docker files that have been developed in collaboration with
  RIS but upkeep is responsibility of the user.

.. toctree::
    :maxdepth: 1

    tools/globus-cli-dockerimage
    tools/igv-dockerimage
    tools/webdev-dockerimage

Images in Development
---------------------

- The following are Docker images that are in a trial phase for usage.

Deprecated Images
-----------------

- These images are no longer supported and no longer recommended

.. toctree::
    :maxdepth: 1

    tools/deprecated-tools/alphafold-deprecated-quickstart
    tools/deprecated-tools/matlab-thpc-quickstart
    tools/deprecated-tools/parabricks-deprecated-quickstart
    tools/deprecated-tools/thpc-deprecated-quickstart